AQA A-Level Organic Chemistry 3.3.16 Chromatography Column Chromatography
3.3.16

Column Chromatography

Purifying bulk samples, stationary and mobile phases, and elution profiles.

Column chromatography is a preparative purification technique used to separate and isolate individual components from a bulk mixture. While TLC is primarily analytical (used to identify or check purity), column chromatography is preparative, enabling chemists to physically collect pure samples of different compounds.

🔑 Key Principle

In column chromatography, a mixture is loaded onto a vertical column packed with a solid stationary phase. A liquid mobile phase is continuously added to the top and flows down the column under gravity. Components travel down the column at different rates based on their relative affinities for the two phases, emerging at the bottom at different times.

Stationary and Mobile Phases in Column Chromatography

The chemical principles governing column chromatography are identical to TLC:

Stationary Phase

A solid adsorbent packed inside a vertical tube. Typically silica gel (\(\text{SiO}_2\)) or alumina (\(\text{Al}_2\text{O}_3\)), which contains polar surface groups.

Mobile Phase (Eluent)

The liquid solvent or solvent mixture loaded onto the top of the column that flows down through the packing material.

During the separation process:

Elution

The process of extracting a compound adsorbed to the stationary phase by washing it through the column with a solvent.

Eluate

The solution exiting the bottom of the column, collected in separate fractions to isolate the individual components.

📝 AQA Examiner Tip

Do not allow a chromatography column to run dry! If the solvent level falls below the top of the silica packing, the silica gel will crack. Solvent will then channel directly through the cracks without interacting with the stationary phase, ruining the separation.

Column Chromatography Experimental Setup

The diagram below shows a typical glass column setup during separation. A mixture containing polar and non-polar compounds has separated into distinct bands moving down the column.

Column Chromatography Apparatus Diagram Eluent (Mobile Phase) Silica Gel Stationary Phase A (Non-polar) B (Polar) Purified A

Gradient Elution Technique

During the run, the polarity of the mobile phase can be altered to speed up the process. A chemist might start with a non-polar solvent (e.g. hexane) to quickly elute non-polar components, leaving polar components bound near the top. Once the non-polar compounds have eluted, the solvent is switched to a more polar one (e.g. ethyl ethanoate). This polar mobile phase competes effectively for adsorption sites on the silica gel, carrying the remaining polar components down the column.

Worked Examples of Column Chromatography

✏️ Worked Example 1
Outline the main steps involved in carrying out column chromatography to separate a mixture of organic dyes.

Solution:

  1. Packing: Place a small plug of cotton wool at the bottom of the glass column to support the stationary phase. Fill the column with a slurry of silica gel and solvent (the stationary phase). Tap the column to remove air bubbles and let it settle.
  2. Loading: Open the stopcock to lower the solvent level to the top of the sand/silica line. Load the concentrated mixture of dyes carefully onto the top of the packing.
  3. Running: Open the tap and add solvent (mobile phase) continuously to the top of the column, maintaining the solvent head.
  4. Collection: As the solvent flows through under gravity, the dyes separate into visible bands. Collect the liquid exiting the column in separate tubes as each band elutes, changing containers between bands to isolate pure components.
✏️ Worked Example 2
A mixture of methylbenzene (non-polar hydrocarbon) and benzoic acid (polar carboxylic acid) is loaded onto a silica gel column with cyclohexane as the eluent.
a) State which compound will elute first.
b) Explain your answer by referencing the stationary and mobile phases.

Solution:

  • a) First to elute: Methylbenzene.
  • b) Explanation: The stationary phase (silica gel) is polar, while the mobile phase (cyclohexane) is non-polar. Benzoic acid is polar and forms hydrogen bonds with the silanol groups on the silica gel, adsorbing strongly. Methylbenzene is non-polar and cannot form hydrogen bonds, so it adsorbs weakly to the silica gel. Instead, methylbenzene dissolves well in the non-polar cyclohexane mobile phase and is carried down rapidly, leaving benzoic acid behind.
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